Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClpbQ60649 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.35□□□□□ -0.27
ClpbQ60649 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.35□□□□□ -0.27
ClpbQ60649 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Mir125a-201ENSMUST00000083545 68 ntBASIC13.35□□□□□ -0.27
ClpbQ60649 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClpbQ60649 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClpbQ60649 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClpbQ60649 Acot6-202ENSMUST00000222921 3622 ntBASIC13.34□□□□□ -0.27
ClpbQ60649 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ClpbQ60649 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.34□□□□□ -0.27
ClpbQ60649 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ClpbQ60649 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.34□□□□□ -0.27
ClpbQ60649 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.34□□□□□ -0.27
ClpbQ60649 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
ClpbQ60649 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.34□□□□□ -0.27
ClpbQ60649 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ClpbQ60649 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.34□□□□□ -0.27
ClpbQ60649 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ClpbQ60649 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClpbQ60649 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClpbQ60649 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ClpbQ60649 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClpbQ60649 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ClpbQ60649 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.33□□□□□ -0.28
ClpbQ60649 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.33□□□□□ -0.28
ClpbQ60649 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Gm12428-201ENSMUST00000119844 727 ntBASIC13.33□□□□□ -0.28
ClpbQ60649 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ClpbQ60649 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.33□□□□□ -0.28
ClpbQ60649 Gm7775-201ENSMUST00000218871 853 ntBASIC13.33□□□□□ -0.28
ClpbQ60649 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.33□□□□□ -0.28
ClpbQ60649 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
ClpbQ60649 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
ClpbQ60649 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.33□□□□□ -0.28
ClpbQ60649 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.33□□□□□ -0.28
ClpbQ60649 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClpbQ60649 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.32□□□□□ -0.28
ClpbQ60649 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClpbQ60649 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.32□□□□□ -0.28
ClpbQ60649 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClpbQ60649 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.32□□□□□ -0.28
ClpbQ60649 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms