Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.22□□□□□ -0.29
Nr1h4Q60641 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.22□□□□□ -0.29
Nr1h4Q60641 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nr1h4Q60641 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Gm15427-201ENSMUST00000117288 531 ntBASIC13.22□□□□□ -0.29
Nr1h4Q60641 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.22□□□□□ -0.29
Nr1h4Q60641 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.22□□□□□ -0.29
Nr1h4Q60641 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Psmb5-202ENSMUST00000227257 622 ntBASIC13.22□□□□□ -0.29
Nr1h4Q60641 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.22□□□□□ -0.29
Nr1h4Q60641 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nr1h4Q60641 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm2445-201ENSMUST00000182798 989 ntBASIC13.21□□□□□ -0.29
Nr1h4Q60641 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm44492-201ENSMUST00000197012 141 ntBASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Gm10819-201ENSMUST00000099988 561 ntBASIC13.21□□□□□ -0.29
Nr1h4Q60641 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nr1h4Q60641 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nr1h4Q60641 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nr1h4Q60641 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nr1h4Q60641 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.21□□□□□ -0.3
Nr1h4Q60641 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.2□□□□□ -0.3
Nr1h4Q60641 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nr1h4Q60641 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms