Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Trav5d-4Q5R1F6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5d-4Q5R1F6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Gm16476-201ENSMUST00000221544 139 ntBASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Gm8396-201ENSMUST00000057361 823 ntBASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5d-4Q5R1F6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Mir1897-201ENSMUST00000122581 272 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Gm28630-201ENSMUST00000187806 498 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Gm6916-202ENSMUST00000205523 195 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms