Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vps13aQ5H8C4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Vps13aQ5H8C4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps13aQ5H8C4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps13aQ5H8C4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps13aQ5H8C4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps13aQ5H8C4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Gm25214-201ENSMUST00000104573 129 ntBASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Gm11618-201ENSMUST00000117946 267 ntBASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Gm27552-201ENSMUST00000183351 62 ntBASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Gm27844-201ENSMUST00000183613 62 ntBASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Gm8385-201ENSMUST00000058999 643 ntBASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Vps13aQ5H8C4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Mir6958-201ENSMUST00000184207 73 ntBASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps13aQ5H8C4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm11597-201ENSMUST00000121423 964 ntBASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm29741-201ENSMUST00000192667 421 ntBASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps13aQ5H8C4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps13aQ5H8C4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Vps13aQ5H8C4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps13aQ5H8C4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps13aQ5H8C4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vps13aQ5H8C4 Gm10434-201ENSMUST00000101158 471 ntBASIC13.43□□□□□ -0.26
Vps13aQ5H8C4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.43□□□□□ -0.26
Vps13aQ5H8C4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms