Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn2bQ56A07 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.74□□□□□ -0.21
Scn2bQ56A07 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn2bQ56A07 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.73□□□□□ -0.21
Scn2bQ56A07 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Gm9824-201ENSMUST00000178707 561 ntBASIC13.73□□□□□ -0.21
Scn2bQ56A07 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.73□□□□□ -0.21
Scn2bQ56A07 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.73□□□□□ -0.21
Scn2bQ56A07 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.73□□□□□ -0.21
Scn2bQ56A07 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn2bQ56A07 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.72□□□□□ -0.21
Scn2bQ56A07 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn2bQ56A07 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn2bQ56A07 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn2bQ56A07 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn2bQ56A07 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms