Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Gm27331-201ENSMUST00000183705 60 ntBASIC15.52■□□□□ 0.08
Srrm1Q52KI8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Mir497b-201ENSMUST00000093601 125 ntBASIC15.52■□□□□ 0.08
Srrm1Q52KI8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srrm1Q52KI8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srrm1Q52KI8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srrm1Q52KI8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.52■□□□□ 0.07
Srrm1Q52KI8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srrm1Q52KI8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srrm1Q52KI8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Srrm1Q52KI8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Srrm1Q52KI8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm15236-201ENSMUST00000117309 379 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Proscos-202ENSMUST00000178990 666 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm38002-201ENSMUST00000193255 180 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm44397-201ENSMUST00000195950 113 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Srrm1Q52KI8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.5■□□□□ 0.07
Srrm1Q52KI8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Mir3547-201ENSMUST00000175461 88 ntBASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gm37008-201ENSMUST00000195712 319 ntBASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Srrm1Q52KI8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Srrm1Q52KI8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Srrm1Q52KI8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Srrm1Q52KI8 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.49■□□□□ 0.07
Srrm1Q52KI8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Srrm1Q52KI8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Srrm1Q52KI8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Srrm1Q52KI8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms