Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Znf48Q3US17 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Znf48Q3US17 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.58□□□□□ -0.56
Znf48Q3US17 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Znf48Q3US17 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Znf48Q3US17 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm13015-201ENSMUST00000118674 204 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm15483-201ENSMUST00000120338 456 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm27838-201ENSMUST00000184829 128 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm28630-201ENSMUST00000187806 498 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm38188-201ENSMUST00000192879 856 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC11.57□□□□□ -0.56
Znf48Q3US17 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm25857-201ENSMUST00000082788 129 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.57□□□□□ -0.56
Znf48Q3US17 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.57□□□□□ -0.56
Znf48Q3US17 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Znf48Q3US17 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.56□□□□□ -0.56
Znf48Q3US17 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.56□□□□□ -0.56
Znf48Q3US17 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Gm16026-204ENSMUST00000162652 683 ntBASIC11.56□□□□□ -0.56
Znf48Q3US17 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.56□□□□□ -0.56
Znf48Q3US17 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.56□□□□□ -0.56
Znf48Q3US17 Gm37293-201ENSMUST00000191658 295 ntBASIC11.56□□□□□ -0.56
Znf48Q3US17 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Znf48Q3US17 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.56□□□□□ -0.56
Znf48Q3US17 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Znf48Q3US17 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Znf48Q3US17 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Znf48Q3US17 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms