Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upf3bQ3ULL6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Gm14719-201ENSMUST00000121891 340 ntBASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upf3bQ3ULL6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.84□□□□□ -0.03
Upf3bQ3ULL6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms