Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.05□□□□□ -0.48
Q3U1D9 Gm19078-201ENSMUST00000206311 727 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Q3U1D9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Q3U1D9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Q3U1D9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Q3U1D9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.04□□□□□ -0.48
Q3U1D9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.04□□□□□ -0.48
Q3U1D9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Q3U1D9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.04□□□□□ -0.48
Q3U1D9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.04□□□□□ -0.48
Q3U1D9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.04□□□□□ -0.48
Q3U1D9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Q3U1D9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Q3U1D9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.04□□□□□ -0.48
Q3U1D9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.04□□□□□ -0.48
Q3U1D9 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.04□□□□□ -0.48
Q3U1D9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.04□□□□□ -0.48
Q3U1D9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.04□□□□□ -0.48
Q3U1D9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.04□□□□□ -0.48
Q3U1D9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Mir497b-201ENSMUST00000093601 125 ntBASIC12.04□□□□□ -0.48
Q3U1D9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Q3U1D9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Q3U1D9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.04□□□□□ -0.48
Q3U1D9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Q3U1D9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3U1D9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.03□□□□□ -0.48
Q3U1D9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.03□□□□□ -0.48
Q3U1D9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.03□□□□□ -0.48
Q3U1D9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Q3U1D9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.03□□□□□ -0.48
Q3U1D9 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.03□□□□□ -0.48
Q3U1D9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.03□□□□□ -0.48
Q3U1D9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Q3U1D9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms