Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43aQ3TL54 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43aQ3TL54 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Gm14822-201ENSMUST00000122247 291 ntBASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Rpph1-201ENSMUST00000175096 319 ntBASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trim43aQ3TL54 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Gm6973-201ENSMUST00000117080 721 ntBASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Mir1895-201ENSMUST00000122615 79 ntBASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim43aQ3TL54 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms