Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Q3KNL4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Q3KNL4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Gm6222-201ENSMUST00000120787 396 ntBASIC13.65□□□□□ -0.22
Q3KNL4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.65□□□□□ -0.22
Q3KNL4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Q3KNL4 Gm44608-201ENSMUST00000206827 855 ntBASIC13.65□□□□□ -0.22
Q3KNL4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Q3KNL4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.65□□□□□ -0.22
Q3KNL4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.65□□□□□ -0.22
Q3KNL4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
Q3KNL4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.65□□□□□ -0.22
Q3KNL4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.65□□□□□ -0.22
Q3KNL4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Q3KNL4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Q3KNL4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.64□□□□□ -0.23
Q3KNL4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Q3KNL4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Q3KNL4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Q3KNL4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.64□□□□□ -0.23
Q3KNL4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.64□□□□□ -0.23
Q3KNL4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.64□□□□□ -0.23
Q3KNL4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Q3KNL4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Q3KNL4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Q3KNL4 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.64□□□□□ -0.23
Q3KNL4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.64□□□□□ -0.23
Q3KNL4 AA543401-201ENSMUST00000164248 1269 ntBASIC13.64□□□□□ -0.23
Q3KNL4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.64□□□□□ -0.23
Q3KNL4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.64□□□□□ -0.23
Q3KNL4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Q3KNL4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.64□□□□□ -0.23
Q3KNL4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.64□□□□□ -0.23
Q3KNL4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Q3KNL4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Q3KNL4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.63□□□□□ -0.23
Q3KNL4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Gm27494-201ENSMUST00000184735 189 ntBASIC13.63□□□□□ -0.23
Q3KNL4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Q3KNL4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Q3KNL4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.63□□□□□ -0.23
Q3KNL4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.63□□□□□ -0.23
Q3KNL4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.63□□□□□ -0.23
Q3KNL4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.63□□□□□ -0.23
Q3KNL4 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.63□□□□□ -0.23
Q3KNL4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Q3KNL4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Q3KNL4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q3KNL4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms