Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim63Q38HM4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim63Q38HM4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim63Q38HM4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Trim63Q38HM4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim63Q38HM4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.4□□□□□ -0.58
Trim63Q38HM4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim63Q38HM4 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim63Q38HM4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Trim63Q38HM4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim63Q38HM4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trim63Q38HM4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim63Q38HM4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.39□□□□□ -0.59
Trim63Q38HM4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Grk6-207ENSMUST00000225925 2769 ntBASIC11.39□□□□□ -0.59
Trim63Q38HM4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.39□□□□□ -0.59
Trim63Q38HM4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.39□□□□□ -0.59
Trim63Q38HM4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.39□□□□□ -0.59
Trim63Q38HM4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim63Q38HM4 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.38□□□□□ -0.59
Trim63Q38HM4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim63Q38HM4 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms