Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 AC130671.2-201ENSMUST00000227224 1621 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gm45242-201ENSMUST00000210666 2129 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gm13937-201ENSMUST00000121000 988 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 CT573086.4-201ENSMUST00000226729 342 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gm42473-201ENSMUST00000201056 2291 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 AC158355.1-201ENSMUST00000215895 1705 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm7722-201ENSMUST00000120646 741 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm9645-201ENSMUST00000197131 792 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 AC138716.2-201ENSMUST00000226670 1016 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Ginm1-202ENSMUST00000065124 300 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm37811-201ENSMUST00000192416 2601 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm26989-201ENSMUST00000182608 749 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 AC121801.1-201ENSMUST00000225363 1899 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm38157-201ENSMUST00000194178 1698 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm6598-201ENSMUST00000202719 2615 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Gm12058-201ENSMUST00000118614 437 ntBASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ush2AQ2QI47 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Gm13019-201ENSMUST00000120000 276 ntBASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Gm6039-201ENSMUST00000121667 1250 ntBASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Gm38355-201ENSMUST00000192514 1570 ntBASIC7.15□□□□□ -1.27
Ush2AQ2QI47 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Gm13812-201ENSMUST00000118061 1347 ntBASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Gm13810-201ENSMUST00000118584 1347 ntBASIC7.15□□□□□ -1.27
Ush2AQ2QI47 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm3329-201ENSMUST00000159873 556 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm10774-201ENSMUST00000188689 204 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm5298-201ENSMUST00000201122 892 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm43702-201ENSMUST00000198772 2546 ntBASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC7.14□□□□□ -1.27
Ush2AQ2QI47 Gm8824-201ENSMUST00000182962 990 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms