Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col19a1Q0VF58 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Gm11222-201ENSMUST00000119005 738 ntBASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Gm18212-201ENSMUST00000211678 889 ntBASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Gm17330-201ENSMUST00000221047 165 ntBASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.68□□□□□ -0.06
Col19a1Q0VF58 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm12403-201ENSMUST00000121384 959 ntBASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm38144-201ENSMUST00000192790 465 ntBASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col19a1Q0VF58 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Sybu-209ENSMUST00000228639 4113 ntBASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col19a1Q0VF58 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms