Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.35□□□□□ -0.27
Atf4Q06507 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.35□□□□□ -0.27
Atf4Q06507 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.35□□□□□ -0.27
Atf4Q06507 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Atf4Q06507 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.34□□□□□ -0.27
Atf4Q06507 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atf4Q06507 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.34□□□□□ -0.27
Atf4Q06507 Gm22709-201ENSMUST00000116893 111 ntBASIC13.34□□□□□ -0.27
Atf4Q06507 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.34□□□□□ -0.27
Atf4Q06507 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.34□□□□□ -0.27
Atf4Q06507 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Atf4Q06507 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atf4Q06507 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.34□□□□□ -0.27
Atf4Q06507 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Atf4Q06507 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atf4Q06507 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.34□□□□□ -0.27
Atf4Q06507 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.34□□□□□ -0.27
Atf4Q06507 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Atf4Q06507 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atf4Q06507 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.34□□□□□ -0.27
Atf4Q06507 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atf4Q06507 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Atf4Q06507 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atf4Q06507 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atf4Q06507 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Atf4Q06507 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Atf4Q06507 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Atf4Q06507 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Gm8988-201ENSMUST00000155015 1240 ntBASIC13.33□□□□□ -0.28
Atf4Q06507 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Atf4Q06507 Gm16476-201ENSMUST00000221544 139 ntBASIC13.33□□□□□ -0.28
Atf4Q06507 AC154848.1-201ENSMUST00000225451 846 ntBASIC13.33□□□□□ -0.28
Atf4Q06507 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Atf4Q06507 BC043934-202ENSMUST00000185694 2356 ntBASIC13.33□□□□□ -0.28
Atf4Q06507 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atf4Q06507 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms