Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Mir698-201ENSMUST00000102164 109 ntBASIC12.2□□□□□ -0.46
Thbs3Q05895 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Mir7684-201ENSMUST00000183858 60 ntBASIC12.2□□□□□ -0.46
Thbs3Q05895 Mir8102-201ENSMUST00000184148 139 ntBASIC12.2□□□□□ -0.46
Thbs3Q05895 Gm27989-201ENSMUST00000184721 107 ntBASIC12.2□□□□□ -0.46
Thbs3Q05895 Mir7023-201ENSMUST00000185093 64 ntBASIC12.2□□□□□ -0.46
Thbs3Q05895 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.2□□□□□ -0.46
Thbs3Q05895 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Thbs3Q05895 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.2□□□□□ -0.46
Thbs3Q05895 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.19□□□□□ -0.46
Thbs3Q05895 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Gm44719-201ENSMUST00000206404 149 ntBASIC12.19□□□□□ -0.46
Thbs3Q05895 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.19□□□□□ -0.46
Thbs3Q05895 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Mir497b-201ENSMUST00000093601 125 ntBASIC12.19□□□□□ -0.46
Thbs3Q05895 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.19□□□□□ -0.46
Thbs3Q05895 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs3Q05895 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs3Q05895 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.18□□□□□ -0.46
Thbs3Q05895 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.18□□□□□ -0.46
Thbs3Q05895 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs3Q05895 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms