Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Xrn1P97789 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.32■□□□□ 0.68
Xrn1P97789 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC19.32■□□□□ 0.68
Xrn1P97789 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC19.32■□□□□ 0.68
Xrn1P97789 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC19.32■□□□□ 0.68
Xrn1P97789 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC19.32■□□□□ 0.68
Xrn1P97789 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Mir5132-201ENSMUST00000175166 71 ntBASIC19.32■□□□□ 0.68
Xrn1P97789 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC19.32■□□□□ 0.68
Xrn1P97789 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Xrn1P97789 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Gm8862-201ENSMUST00000198379 1346 ntBASIC19.32■□□□□ 0.68
Xrn1P97789 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Xrn1P97789 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Xrn1P97789 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrn1P97789 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Gm12539-201ENSMUST00000121549 1098 ntBASIC19.31■□□□□ 0.68
Xrn1P97789 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Xrn1P97789 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC19.31■□□□□ 0.68
Xrn1P97789 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 AC167669.2-201ENSMUST00000224417 1620 ntBASIC19.31■□□□□ 0.68
Xrn1P97789 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Xrn1P97789 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC19.31■□□□□ 0.68
Xrn1P97789 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC19.31■□□□□ 0.68
Xrn1P97789 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Xrn1P97789 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC19.31■□□□□ 0.68
Xrn1P97789 Gm14028-201ENSMUST00000117434 479 ntBASIC19.31■□□□□ 0.68
Xrn1P97789 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC19.31■□□□□ 0.68
Xrn1P97789 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 n-R5s77-201ENSMUST00000083757 119 ntBASIC19.31■□□□□ 0.68
Xrn1P97789 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Xrn1P97789 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Xrn1P97789 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC19.3■□□□□ 0.68
Xrn1P97789 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC19.3■□□□□ 0.68
Xrn1P97789 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Xrn1P97789 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Gm25043-201ENSMUST00000158604 212 ntBASIC19.3■□□□□ 0.68
Xrn1P97789 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Xrn1P97789 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Xrn1P97789 Gm44772-201ENSMUST00000207623 1191 ntBASIC19.3■□□□□ 0.68
Xrn1P97789 Gm6458-201ENSMUST00000211573 635 ntBASIC19.3■□□□□ 0.68
Xrn1P97789 Nsd1-205ENSMUST00000224693 852 ntBASIC19.3■□□□□ 0.68
Xrn1P97789 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC19.3■□□□□ 0.68
Xrn1P97789 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Gm43289-201ENSMUST00000200537 1475 ntBASIC19.3■□□□□ 0.68
Xrn1P97789 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrn1P97789 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Xrn1P97789 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC19.29■□□□□ 0.68
Xrn1P97789 Gm8885-201ENSMUST00000189382 598 ntBASIC19.29■□□□□ 0.68
Xrn1P97789 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Xrn1P97789 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Xrn1P97789 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrn1P97789 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Xrn1P97789 AC123857.2-201ENSMUST00000225756 1582 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Gm10434-201ENSMUST00000101158 471 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC19.28■□□□□ 0.68
Xrn1P97789 Gm5869-201ENSMUST00000200248 1257 ntBASIC19.28■□□□□ 0.68
Xrn1P97789 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrn1P97789 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms