Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Gm43170-201ENSMUST00000199827 612 ntBASIC14.36□□□□□ -0.11
Vps45P97390 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps45P97390 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps45P97390 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps45P97390 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps45P97390 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps45P97390 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.36□□□□□ -0.11
Vps45P97390 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.36□□□□□ -0.11
Vps45P97390 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps45P97390 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps45P97390 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps45P97390 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.36□□□□□ -0.11
Vps45P97390 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps45P97390 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps45P97390 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Vps45P97390 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps45P97390 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Vps45P97390 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps45P97390 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Gm22189-201ENSMUST00000103822 86 ntBASIC14.35□□□□□ -0.11
Vps45P97390 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Vps45P97390 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps45P97390 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.35□□□□□ -0.11
Vps45P97390 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.35□□□□□ -0.11
Vps45P97390 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps45P97390 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Vps45P97390 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps45P97390 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps45P97390 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps45P97390 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps45P97390 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.34□□□□□ -0.11
Vps45P97390 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.34□□□□□ -0.11
Vps45P97390 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps45P97390 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Vps45P97390 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.34□□□□□ -0.11
Vps45P97390 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.34□□□□□ -0.11
Vps45P97390 Gm37917-201ENSMUST00000194711 392 ntBASIC14.34□□□□□ -0.11
Vps45P97390 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.34□□□□□ -0.11
Vps45P97390 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps45P97390 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps45P97390 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms