Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.4□□□□□ -0.42
SgcbP82349 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
SgcbP82349 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.4□□□□□ -0.43
SgcbP82349 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.4□□□□□ -0.43
SgcbP82349 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.4□□□□□ -0.43
SgcbP82349 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SgcbP82349 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.39□□□□□ -0.43
SgcbP82349 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Syt7-205ENSMUST00000224135 1557 ntBASIC12.39□□□□□ -0.43
SgcbP82349 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SgcbP82349 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SgcbP82349 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Gm6754-201ENSMUST00000117124 913 ntBASIC12.39□□□□□ -0.43
SgcbP82349 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Gm24694-201ENSMUST00000180054 110 ntBASIC12.39□□□□□ -0.43
SgcbP82349 Gm27663-201ENSMUST00000184839 110 ntBASIC12.39□□□□□ -0.43
SgcbP82349 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.39□□□□□ -0.43
SgcbP82349 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SgcbP82349 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcbP82349 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SgcbP82349 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SgcbP82349 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SgcbP82349 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.38□□□□□ -0.43
SgcbP82349 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SgcbP82349 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.38□□□□□ -0.43
SgcbP82349 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.38□□□□□ -0.43
SgcbP82349 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SgcbP82349 Gm10766-202ENSMUST00000194123 606 ntBASIC12.38□□□□□ -0.43
SgcbP82349 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.38□□□□□ -0.43
SgcbP82349 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SgcbP82349 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.38□□□□□ -0.43
SgcbP82349 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SgcbP82349 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcbP82349 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.37□□□□□ -0.43
SgcbP82349 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SgcbP82349 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
SgcbP82349 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.37□□□□□ -0.43
SgcbP82349 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms