Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.67□□□□□ -0.22
SgcgP82348 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.67□□□□□ -0.22
SgcgP82348 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.67□□□□□ -0.22
SgcgP82348 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SgcgP82348 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.67□□□□□ -0.22
SgcgP82348 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.67□□□□□ -0.22
SgcgP82348 Gm43094-201ENSMUST00000196549 921 ntBASIC13.67□□□□□ -0.22
SgcgP82348 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.67□□□□□ -0.22
SgcgP82348 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.67□□□□□ -0.22
SgcgP82348 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.67□□□□□ -0.22
SgcgP82348 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SgcgP82348 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcgP82348 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.66□□□□□ -0.22
SgcgP82348 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SgcgP82348 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.66□□□□□ -0.22
SgcgP82348 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.66□□□□□ -0.22
SgcgP82348 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SgcgP82348 Gm12134-201ENSMUST00000122109 520 ntBASIC13.66□□□□□ -0.22
SgcgP82348 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Gm8584-201ENSMUST00000171982 758 ntBASIC13.66□□□□□ -0.22
SgcgP82348 Mir7654-201ENSMUST00000185082 70 ntBASIC13.66□□□□□ -0.22
SgcgP82348 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.66□□□□□ -0.22
SgcgP82348 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.66□□□□□ -0.22
SgcgP82348 Gm18307-201ENSMUST00000206864 949 ntBASIC13.66□□□□□ -0.22
SgcgP82348 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SgcgP82348 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SgcgP82348 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.66□□□□□ -0.22
SgcgP82348 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SgcgP82348 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcgP82348 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SgcgP82348 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SgcgP82348 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.65□□□□□ -0.22
SgcgP82348 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Gm28911-201ENSMUST00000188837 117 ntBASIC13.65□□□□□ -0.22
SgcgP82348 Gm29741-201ENSMUST00000192667 421 ntBASIC13.65□□□□□ -0.22
SgcgP82348 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.65□□□□□ -0.22
SgcgP82348 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.65□□□□□ -0.22
SgcgP82348 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.65□□□□□ -0.22
SgcgP82348 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.65□□□□□ -0.22
SgcgP82348 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcgP82348 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms