Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ldb1P70662 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.85□□□□□ -0.19
Ldb1P70662 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ldb1P70662 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.85□□□□□ -0.19
Ldb1P70662 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb1P70662 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ldb1P70662 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ldb1P70662 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ldb1P70662 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ldb1P70662 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.84□□□□□ -0.19
Ldb1P70662 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.84□□□□□ -0.19
Ldb1P70662 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.84□□□□□ -0.19
Ldb1P70662 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ldb1P70662 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ldb1P70662 Gm13223-201ENSMUST00000118609 747 ntBASIC13.84□□□□□ -0.19
Ldb1P70662 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ldb1P70662 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Gm33320-201ENSMUST00000192232 530 ntBASIC13.84□□□□□ -0.19
Ldb1P70662 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.84□□□□□ -0.19
Ldb1P70662 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ldb1P70662 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ldb1P70662 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb1P70662 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.83□□□□□ -0.19
Ldb1P70662 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.83□□□□□ -0.19
Ldb1P70662 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ldb1P70662 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ldb1P70662 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ldb1P70662 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.83□□□□□ -0.2
Ldb1P70662 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.83□□□□□ -0.2
Ldb1P70662 Gm25144-201ENSMUST00000179561 110 ntBASIC13.83□□□□□ -0.2
Ldb1P70662 Gm25352-201ENSMUST00000179815 110 ntBASIC13.83□□□□□ -0.2
Ldb1P70662 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ldb1P70662 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ldb1P70662 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb1P70662 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Ldb1P70662 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ldb1P70662 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ldb1P70662 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.82□□□□□ -0.2
Ldb1P70662 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ldb1P70662 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.82□□□□□ -0.2
Ldb1P70662 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ldb1P70662 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.82□□□□□ -0.2
Ldb1P70662 Gm15460-201ENSMUST00000118147 391 ntBASIC13.82□□□□□ -0.2
Ldb1P70662 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.82□□□□□ -0.2
Ldb1P70662 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Gm44344-201ENSMUST00000200287 129 ntBASIC13.82□□□□□ -0.2
Ldb1P70662 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.82□□□□□ -0.2
Ldb1P70662 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb1P70662 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms