Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm29541-201ENSMUST00000191351 678 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm29741-201ENSMUST00000192667 421 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm44335-201ENSMUST00000196879 141 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm44297-201ENSMUST00000198304 141 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm44346-201ENSMUST00000198851 141 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm44719-201ENSMUST00000206404 149 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb1P63158 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hmgb1P63158 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.29■□□□□ 0.04
Hmgb1P63158 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb1P63158 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb1P63158 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.28■□□□□ 0.04
Hmgb1P63158 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb1P63158 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmgb1P63158 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmgb1P63158 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.28■□□□□ 0.04
Hmgb1P63158 Gm43474-201ENSMUST00000196415 774 ntBASIC15.28■□□□□ 0.04
Hmgb1P63158 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.28■□□□□ 0.04
Hmgb1P63158 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb1P63158 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb1P63158 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.28■□□□□ 0.04
Hmgb1P63158 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb1P63158 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hmgb1P63158 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hmgb1P63158 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.27■□□□□ 0.04
Hmgb1P63158 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hmgb1P63158 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hmgb1P63158 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms