Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm3P62311 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Rubie-203ENSMUST00000227803 2430 ntBASIC12.62□□□□□ -0.39
Lsm3P62311 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.62□□□□□ -0.39
Lsm3P62311 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.62□□□□□ -0.39
Lsm3P62311 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.62□□□□□ -0.39
Lsm3P62311 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.62□□□□□ -0.39
Lsm3P62311 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.62□□□□□ -0.39
Lsm3P62311 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm3P62311 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm3P62311 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Lsm3P62311 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.61□□□□□ -0.39
Lsm3P62311 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.61□□□□□ -0.39
Lsm3P62311 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lsm3P62311 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lsm3P62311 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Gm27742-201ENSMUST00000184667 60 ntBASIC12.61□□□□□ -0.39
Lsm3P62311 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.61□□□□□ -0.39
Lsm3P62311 Pck2-205ENSMUST00000226352 2784 ntBASIC12.61□□□□□ -0.39
Lsm3P62311 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.61□□□□□ -0.39
Lsm3P62311 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lsm3P62311 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm3P62311 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lsm3P62311 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Lsm3P62311 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm3P62311 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm3P62311 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms