Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cks1bP61025 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.93□□□□□ -0.82
Cks1bP61025 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Cks1bP61025 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1bP61025 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Gm14859-201ENSMUST00000117752 357 ntBASIC9.92□□□□□ -0.82
Cks1bP61025 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC9.92□□□□□ -0.82
Cks1bP61025 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Cks1bP61025 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9.92□□□□□ -0.82
Cks1bP61025 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Cks1bP61025 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1bP61025 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1bP61025 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC9.91□□□□□ -0.82
Cks1bP61025 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.91□□□□□ -0.82
Cks1bP61025 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Cks1bP61025 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cks1bP61025 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC9.91□□□□□ -0.82
Cks1bP61025 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Cks1bP61025 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 CT010506.4-201ENSMUST00000225457 351 ntBASIC9.91□□□□□ -0.82
Cks1bP61025 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Cks1bP61025 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.91□□□□□ -0.82
Cks1bP61025 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.91□□□□□ -0.82
Cks1bP61025 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.91□□□□□ -0.82
Cks1bP61025 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1bP61025 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms