Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup43P59235 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup43P59235 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Nup43P59235 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Nup43P59235 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nup43P59235 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup43P59235 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup43P59235 Gm29667-201ENSMUST00000190817 490 ntBASIC13.12□□□□□ -0.31
Nup43P59235 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Gm20445-201ENSMUST00000061905 565 ntBASIC13.12□□□□□ -0.31
Nup43P59235 Mir497b-201ENSMUST00000093601 125 ntBASIC13.12□□□□□ -0.31
Nup43P59235 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup43P59235 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup43P59235 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nup43P59235 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nup43P59235 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nup43P59235 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup43P59235 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.11□□□□□ -0.31
Nup43P59235 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.11□□□□□ -0.31
Nup43P59235 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.11□□□□□ -0.31
Nup43P59235 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup43P59235 Gm25925-201ENSMUST00000158314 306 ntBASIC13.11□□□□□ -0.31
Nup43P59235 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm8927-201ENSMUST00000181978 981 ntBASIC13.11□□□□□ -0.31
Nup43P59235 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.11□□□□□ -0.31
Nup43P59235 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup43P59235 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm3222-201ENSMUST00000071282 990 ntBASIC13.11□□□□□ -0.31
Nup43P59235 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup43P59235 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.11□□□□□ -0.31
Nup43P59235 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.11□□□□□ -0.31
Nup43P59235 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.11□□□□□ -0.31
Nup43P59235 Syt7-204ENSMUST00000223586 1344 ntBASIC13.11□□□□□ -0.31
Nup43P59235 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup43P59235 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
Nup43P59235 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Nup43P59235 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Nup43P59235 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Gm13385-201ENSMUST00000121089 220 ntBASIC13.1□□□□□ -0.31
Nup43P59235 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.1□□□□□ -0.31
Nup43P59235 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms