Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Atxn1P54254 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.78□□□□□ -0.2
Atxn1P54254 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Atxn1P54254 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Atxn1P54254 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.78□□□□□ -0.2
Atxn1P54254 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.78□□□□□ -0.2
Atxn1P54254 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Atxn1P54254 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Gm29649-201ENSMUST00000185649 419 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 Gm7287-201ENSMUST00000205267 602 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 Gm8463-201ENSMUST00000208573 613 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.78□□□□□ -0.2
Atxn1P54254 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.78□□□□□ -0.2
Atxn1P54254 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.78□□□□□ -0.2
Atxn1P54254 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atxn1P54254 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atxn1P54254 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atxn1P54254 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atxn1P54254 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atxn1P54254 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atxn1P54254 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Atxn1P54254 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Gm13464-201ENSMUST00000119418 935 ntBASIC13.77□□□□□ -0.21
Atxn1P54254 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.77□□□□□ -0.21
Atxn1P54254 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.77□□□□□ -0.21
Atxn1P54254 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.77□□□□□ -0.21
Atxn1P54254 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.77□□□□□ -0.21
Atxn1P54254 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.77□□□□□ -0.21
Atxn1P54254 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Gm18054-201ENSMUST00000207539 555 ntBASIC13.77□□□□□ -0.21
Atxn1P54254 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.77□□□□□ -0.21
Atxn1P54254 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Atxn1P54254 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.77□□□□□ -0.21
Atxn1P54254 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Atxn1P54254 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.77□□□□□ -0.21
Atxn1P54254 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atxn1P54254 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.76□□□□□ -0.21
Atxn1P54254 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Atxn1P54254 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Atxn1P54254 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.76□□□□□ -0.21
Atxn1P54254 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.76□□□□□ -0.21
Atxn1P54254 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 Gm2451-201ENSMUST00000199447 999 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 Gm43822-201ENSMUST00000200285 476 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 Gm10290-201ENSMUST00000200451 999 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 Gm18753-201ENSMUST00000201000 566 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.76□□□□□ -0.21
Atxn1P54254 Gm17795-201ENSMUST00000214505 757 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.76□□□□□ -0.21
Atxn1P54254 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Atxn1P54254 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Atxn1P54254 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Atxn1P54254 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atxn1P54254 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms