Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdx1P52946 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pdx1P52946 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.73□□□□□ -0.21
Pdx1P52946 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.73□□□□□ -0.21
Pdx1P52946 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdx1P52946 Gm27838-201ENSMUST00000184829 128 ntBASIC13.73□□□□□ -0.21
Pdx1P52946 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pdx1P52946 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.73□□□□□ -0.21
Pdx1P52946 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.73□□□□□ -0.21
Pdx1P52946 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.73□□□□□ -0.21
Pdx1P52946 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pdx1P52946 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pdx1P52946 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pdx1P52946 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pdx1P52946 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.72□□□□□ -0.21
Pdx1P52946 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.72□□□□□ -0.21
Pdx1P52946 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.72□□□□□ -0.21
Pdx1P52946 Gm8927-201ENSMUST00000181978 981 ntBASIC13.72□□□□□ -0.21
Pdx1P52946 Gm4804-201ENSMUST00000182234 999 ntBASIC13.72□□□□□ -0.21
Pdx1P52946 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Gm3222-201ENSMUST00000071282 990 ntBASIC13.72□□□□□ -0.21
Pdx1P52946 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pdx1P52946 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pdx1P52946 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.72□□□□□ -0.21
Pdx1P52946 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pdx1P52946 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdx1P52946 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.72□□□□□ -0.21
Pdx1P52946 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Pdx1P52946 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pdx1P52946 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pdx1P52946 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pdx1P52946 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdx1P52946 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Gm13385-201ENSMUST00000121089 220 ntBASIC13.71□□□□□ -0.21
Pdx1P52946 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.71□□□□□ -0.21
Pdx1P52946 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.71□□□□□ -0.21
Pdx1P52946 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.71□□□□□ -0.21
Pdx1P52946 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.71□□□□□ -0.21
Pdx1P52946 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdx1P52946 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.71□□□□□ -0.21
Pdx1P52946 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdx1P52946 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdx1P52946 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Pdx1P52946 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Pdx1P52946 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pdx1P52946 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms