Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TgfaP48030 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TgfaP48030 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TgfaP48030 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.01□□□□□ -0.49
TgfaP48030 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Gm27331-201ENSMUST00000183705 60 ntBASIC12.01□□□□□ -0.49
TgfaP48030 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Gm9823-201ENSMUST00000051212 327 ntBASIC12.01□□□□□ -0.49
TgfaP48030 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.01□□□□□ -0.49
TgfaP48030 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.01□□□□□ -0.49
TgfaP48030 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.01□□□□□ -0.49
TgfaP48030 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TgfaP48030 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TgfaP48030 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Gm10339-203ENSMUST00000225409 1671 ntBASIC12□□□□□ -0.49
TgfaP48030 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TgfaP48030 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TgfaP48030 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Gm8213-201ENSMUST00000118191 441 ntBASIC12□□□□□ -0.49
TgfaP48030 Mir3102-201ENSMUST00000175555 104 ntBASIC12□□□□□ -0.49
TgfaP48030 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12□□□□□ -0.49
TgfaP48030 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12□□□□□ -0.49
TgfaP48030 Gm44364-201ENSMUST00000198368 141 ntBASIC12□□□□□ -0.49
TgfaP48030 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12□□□□□ -0.49
TgfaP48030 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Gm5161-201ENSMUST00000075243 853 ntBASIC12□□□□□ -0.49
TgfaP48030 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TgfaP48030 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TgfaP48030 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TgfaP48030 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TgfaP48030 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
TgfaP48030 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
TgfaP48030 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TgfaP48030 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 Mir698-201ENSMUST00000102164 109 ntBASIC11.99□□□□□ -0.49
TgfaP48030 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TgfaP48030 Gm1335-201ENSMUST00000121653 386 ntBASIC11.99□□□□□ -0.49
TgfaP48030 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms