Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd4P46935 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd4P46935 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.6■□□□□ 0.25
Nedd4P46935 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Nedd4P46935 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nedd4P46935 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nedd4P46935 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Gm14263-201ENSMUST00000117955 746 ntBASIC16.59■□□□□ 0.25
Nedd4P46935 B9d1os-201ENSMUST00000137010 674 ntBASIC16.59■□□□□ 0.25
Nedd4P46935 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.59■□□□□ 0.25
Nedd4P46935 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.59■□□□□ 0.25
Nedd4P46935 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.59■□□□□ 0.25
Nedd4P46935 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.59■□□□□ 0.25
Nedd4P46935 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.59■□□□□ 0.25
Nedd4P46935 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Nedd4P46935 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nedd4P46935 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nedd4P46935 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nedd4P46935 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nedd4P46935 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nedd4P46935 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nedd4P46935 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Nedd4P46935 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.58■□□□□ 0.24
Nedd4P46935 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.58■□□□□ 0.24
Nedd4P46935 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Nedd4P46935 Gm24514-201ENSMUST00000174961 285 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm29608-201ENSMUST00000190444 463 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.58■□□□□ 0.24
Nedd4P46935 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.58■□□□□ 0.24
Nedd4P46935 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nedd4P46935 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.58■□□□□ 0.24
Nedd4P46935 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nedd4P46935 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.57■□□□□ 0.24
Nedd4P46935 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.57■□□□□ 0.24
Nedd4P46935 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.57■□□□□ 0.24
Nedd4P46935 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.57■□□□□ 0.24
Nedd4P46935 Gm24990-201ENSMUST00000157406 323 ntBASIC16.57■□□□□ 0.24
Nedd4P46935 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.57■□□□□ 0.24
Nedd4P46935 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.57■□□□□ 0.24
Nedd4P46935 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.57■□□□□ 0.24
Nedd4P46935 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.57■□□□□ 0.24
Nedd4P46935 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nedd4P46935 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.56■□□□□ 0.24
Nedd4P46935 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nedd4P46935 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms