Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx2-6P43688 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.12□□□□□ -0.31
Nkx2-6P43688 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Mir7085-201ENSMUST00000184353 66 ntBASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm27772-201ENSMUST00000184900 187 ntBASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm27892-201ENSMUST00000185017 106 ntBASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-6P43688 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Gm11524-201ENSMUST00000119349 807 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Mir1894-201ENSMUST00000122802 81 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.11□□□□□ -0.31
Nkx2-6P43688 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-6P43688 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms