Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfsf4P43488 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.4□□□□□ -0.26
Tnfsf4P43488 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.4□□□□□ -0.26
Tnfsf4P43488 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Gm45453-201ENSMUST00000211758 853 ntBASIC13.4□□□□□ -0.26
Tnfsf4P43488 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfsf4P43488 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tnfsf4P43488 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tnfsf4P43488 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
Tnfsf4P43488 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.39□□□□□ -0.27
Tnfsf4P43488 Gm13015-201ENSMUST00000118674 204 ntBASIC13.39□□□□□ -0.27
Tnfsf4P43488 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.39□□□□□ -0.27
Tnfsf4P43488 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Gm27631-201ENSMUST00000184163 466 ntBASIC13.39□□□□□ -0.27
Tnfsf4P43488 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Gm18049-201ENSMUST00000208909 581 ntBASIC13.39□□□□□ -0.27
Tnfsf4P43488 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms