Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.73□□□□□ -0.37
Nkx2-2P42586 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.73□□□□□ -0.37
Nkx2-2P42586 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Mir7684-201ENSMUST00000183858 60 ntBASIC12.73□□□□□ -0.37
Nkx2-2P42586 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.73□□□□□ -0.37
Nkx2-2P42586 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-2P42586 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.72□□□□□ -0.37
Nkx2-2P42586 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Gm15240-201ENSMUST00000118156 720 ntBASIC12.72□□□□□ -0.37
Nkx2-2P42586 Gm12151-201ENSMUST00000121374 290 ntBASIC12.72□□□□□ -0.37
Nkx2-2P42586 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Mir8102-201ENSMUST00000184148 139 ntBASIC12.72□□□□□ -0.37
Nkx2-2P42586 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.72□□□□□ -0.37
Nkx2-2P42586 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.72□□□□□ -0.37
Nkx2-2P42586 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-2P42586 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.71□□□□□ -0.37
Nkx2-2P42586 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Gm15487-201ENSMUST00000122373 465 ntBASIC12.71□□□□□ -0.37
Nkx2-2P42586 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Gm27838-201ENSMUST00000184829 128 ntBASIC12.71□□□□□ -0.37
Nkx2-2P42586 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nkx2-2P42586 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.71□□□□□ -0.38
Nkx2-2P42586 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-2P42586 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-2P42586 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms