Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab5cP35278 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Rab5cP35278 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rab5cP35278 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab5cP35278 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.29□□□□□ -0.6
Rab5cP35278 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.29□□□□□ -0.6
Rab5cP35278 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab5cP35278 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.29□□□□□ -0.6
Rab5cP35278 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rab5cP35278 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab5cP35278 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.28□□□□□ -0.6
Rab5cP35278 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.28□□□□□ -0.6
Rab5cP35278 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.28□□□□□ -0.6
Rab5cP35278 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.28□□□□□ -0.6
Rab5cP35278 Gm11950-201ENSMUST00000121615 838 ntBASIC11.28□□□□□ -0.6
Rab5cP35278 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.28□□□□□ -0.6
Rab5cP35278 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.28□□□□□ -0.6
Rab5cP35278 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.28□□□□□ -0.6
Rab5cP35278 Gm7506-201ENSMUST00000207758 815 ntBASIC11.28□□□□□ -0.6
Rab5cP35278 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.28□□□□□ -0.6
Rab5cP35278 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Rab5cP35278 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab5cP35278 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab5cP35278 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rab5cP35278 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rab5cP35278 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Rab5cP35278 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab5cP35278 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab5cP35278 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rab5cP35278 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.27□□□□□ -0.6
Rab5cP35278 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab5cP35278 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab5cP35278 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Rab5cP35278 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.27□□□□□ -0.61
Rab5cP35278 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.27□□□□□ -0.61
Rab5cP35278 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.27□□□□□ -0.61
Rab5cP35278 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.27□□□□□ -0.61
Rab5cP35278 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab5cP35278 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms