Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.8□□□□□ -0.36
Nedd8P29595 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.8□□□□□ -0.36
Nedd8P29595 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nedd8P29595 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.8□□□□□ -0.36
Nedd8P29595 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.8□□□□□ -0.36
Nedd8P29595 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.8□□□□□ -0.36
Nedd8P29595 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.8□□□□□ -0.36
Nedd8P29595 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nedd8P29595 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Nedd8P29595 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nedd8P29595 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nedd8P29595 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.79□□□□□ -0.36
Nedd8P29595 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nedd8P29595 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.79□□□□□ -0.36
Nedd8P29595 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nedd8P29595 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Nedd8P29595 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nedd8P29595 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.79□□□□□ -0.36
Nedd8P29595 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.79□□□□□ -0.36
Nedd8P29595 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nedd8P29595 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nedd8P29595 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd8P29595 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nedd8P29595 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.78□□□□□ -0.36
Nedd8P29595 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.78□□□□□ -0.36
Nedd8P29595 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.78□□□□□ -0.36
Nedd8P29595 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.78□□□□□ -0.36
Nedd8P29595 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms