Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.82□□□□□ -0.2
Nckap1P28660 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Nckap1P28660 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nckap1P28660 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nckap1P28660 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Nckap1P28660 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nckap1P28660 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.82□□□□□ -0.2
Nckap1P28660 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nckap1P28660 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm11524-201ENSMUST00000119349 807 ntBASIC13.81□□□□□ -0.2
Nckap1P28660 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.81□□□□□ -0.2
Nckap1P28660 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm17150-201ENSMUST00000165577 381 ntBASIC13.81□□□□□ -0.2
Nckap1P28660 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm43094-201ENSMUST00000196549 921 ntBASIC13.81□□□□□ -0.2
Nckap1P28660 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nckap1P28660 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.81□□□□□ -0.2
Nckap1P28660 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.81□□□□□ -0.2
Nckap1P28660 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.81□□□□□ -0.2
Nckap1P28660 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.81□□□□□ -0.2
Nckap1P28660 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nckap1P28660 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nckap1P28660 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nckap1P28660 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.8□□□□□ -0.2
Nckap1P28660 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nckap1P28660 Gm15678-201ENSMUST00000117573 960 ntBASIC13.8□□□□□ -0.2
Nckap1P28660 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nckap1P28660 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.8□□□□□ -0.2
Nckap1P28660 Gm6266-201ENSMUST00000203844 806 ntBASIC13.8□□□□□ -0.2
Nckap1P28660 Gm19078-201ENSMUST00000206311 727 ntBASIC13.8□□□□□ -0.2
Nckap1P28660 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nckap1P28660 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.8□□□□□ -0.2
Nckap1P28660 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.8□□□□□ -0.2
Nckap1P28660 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nckap1P28660 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
Nckap1P28660 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Nckap1P28660 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nckap1P28660 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nckap1P28660 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.79□□□□□ -0.2
Nckap1P28660 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nckap1P28660 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Nckap1P28660 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.79□□□□□ -0.2
Nckap1P28660 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.79□□□□□ -0.2
Nckap1P28660 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms