Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hmgn1P18608 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn1P18608 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn1P18608 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn1P18608 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn1P18608 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgn1P18608 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn1P18608 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgn1P18608 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn1P18608 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn1P18608 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 Gm14140-201ENSMUST00000119999 995 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 AA543401-201ENSMUST00000164248 1269 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Gm29741-201ENSMUST00000192667 421 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 AA619741-201ENSMUST00000195095 646 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgn1P18608 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.69□□□□□ -0.38
Hmgn1P18608 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Hmgn1P18608 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn1P18608 BC001981-202ENSMUST00000191393 1545 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.68□□□□□ -0.38
Hmgn1P18608 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn1P18608 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn1P18608 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm29310-201ENSMUST00000185468 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21825-201ENSMUST00000185728 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm29109-201ENSMUST00000185895 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21896-201ENSMUST00000186520 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21873-201ENSMUST00000186728 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21794-201ENSMUST00000187056 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21880-201ENSMUST00000187275 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21826-201ENSMUST00000187451 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21198-201ENSMUST00000188393 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21749-201ENSMUST00000189343 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21901-201ENSMUST00000189568 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm29424-201ENSMUST00000189716 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm28599-201ENSMUST00000189838 694 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21867-201ENSMUST00000189917 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm29269-201ENSMUST00000190087 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21722-201ENSMUST00000190153 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm28423-201ENSMUST00000190701 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21899-201ENSMUST00000190745 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21910-201ENSMUST00000191163 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21849-201ENSMUST00000191571 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm28678-201ENSMUST00000191593 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm20910-201ENSMUST00000193268 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Gm21871-201ENSMUST00000194621 696 ntBASIC12.68□□□□□ -0.38
Hmgn1P18608 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn1P18608 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn1P18608 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn1P18608 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms