Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Msx1P13297 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.23□□□□□ -0.29
Msx1P13297 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Msx1P13297 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.23□□□□□ -0.29
Msx1P13297 Gm10766-202ENSMUST00000194123 606 ntBASIC13.23□□□□□ -0.29
Msx1P13297 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.23□□□□□ -0.29
Msx1P13297 Gm45359-201ENSMUST00000210635 427 ntBASIC13.23□□□□□ -0.29
Msx1P13297 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.23□□□□□ -0.29
Msx1P13297 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.23□□□□□ -0.29
Msx1P13297 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Msx1P13297 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Msx1P13297 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Msx1P13297 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Msx1P13297 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Msx1P13297 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Msx1P13297 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.22□□□□□ -0.29
Msx1P13297 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Msx1P13297 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Msx1P13297 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.22□□□□□ -0.29
Msx1P13297 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.22□□□□□ -0.29
Msx1P13297 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Gm21854-201ENSMUST00000179901 471 ntBASIC13.22□□□□□ -0.29
Msx1P13297 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.22□□□□□ -0.29
Msx1P13297 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.22□□□□□ -0.29
Msx1P13297 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Msx1P13297 Gm45453-201ENSMUST00000211758 853 ntBASIC13.22□□□□□ -0.29
Msx1P13297 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.22□□□□□ -0.29
Msx1P13297 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Msx1P13297 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Msx1P13297 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msx1P13297 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.21□□□□□ -0.29
Msx1P13297 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.21□□□□□ -0.29
Msx1P13297 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.21□□□□□ -0.29
Msx1P13297 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Msx1P13297 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.21□□□□□ -0.29
Msx1P13297 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.21□□□□□ -0.29
Msx1P13297 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Msx1P13297 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Msx1P13297 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Msx1P13297 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.21□□□□□ -0.29
Msx1P13297 Gm21147-201ENSMUST00000186046 913 ntBASIC13.21□□□□□ -0.29
Msx1P13297 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.21□□□□□ -0.29
Msx1P13297 Gm19220-201ENSMUST00000222682 803 ntBASIC13.21□□□□□ -0.29
Msx1P13297 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msx1P13297 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms