Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.66□□□□□ -0.54
Hoxa3P02831 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm14928-201ENSMUST00000120198 477 ntBASIC11.66□□□□□ -0.54
Hoxa3P02831 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm10766-202ENSMUST00000194123 606 ntBASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Hoxa3P02831 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Gm15957-201ENSMUST00000118893 974 ntBASIC11.65□□□□□ -0.54
Hoxa3P02831 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.65□□□□□ -0.54
Hoxa3P02831 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.65□□□□□ -0.54
Hoxa3P02831 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa3P02831 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa3P02831 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Hoxa3P02831 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Hoxa3P02831 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Hoxa3P02831 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Hoxa3P02831 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hoxa3P02831 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Hoxa3P02831 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.64□□□□□ -0.55
Hoxa3P02831 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hoxa3P02831 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.64□□□□□ -0.55
Hoxa3P02831 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Hoxa3P02831 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Gm12585-201ENSMUST00000117307 290 ntBASIC11.64□□□□□ -0.55
Hoxa3P02831 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.64□□□□□ -0.55
Hoxa3P02831 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.64□□□□□ -0.55
Hoxa3P02831 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hoxa3P02831 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Hoxa3P02831 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms