Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CopeO89079 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CopeO89079 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopeO89079 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CopeO89079 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CopeO89079 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CopeO89079 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CopeO89079 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.31□□□□□ -0.12
CopeO89079 Gm18733-201ENSMUST00000173950 856 ntBASIC14.31□□□□□ -0.12
CopeO89079 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.31□□□□□ -0.12
CopeO89079 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CopeO89079 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CopeO89079 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.31□□□□□ -0.12
CopeO89079 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CopeO89079 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopeO89079 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CopeO89079 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CopeO89079 Gm29310-201ENSMUST00000185468 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21825-201ENSMUST00000185728 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm29109-201ENSMUST00000185895 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21896-201ENSMUST00000186520 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21873-201ENSMUST00000186728 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21794-201ENSMUST00000187056 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21880-201ENSMUST00000187275 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21826-201ENSMUST00000187451 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21198-201ENSMUST00000188393 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21749-201ENSMUST00000189343 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21901-201ENSMUST00000189568 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm29424-201ENSMUST00000189716 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm28599-201ENSMUST00000189838 694 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21867-201ENSMUST00000189917 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm29269-201ENSMUST00000190087 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21722-201ENSMUST00000190153 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm28423-201ENSMUST00000190701 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21899-201ENSMUST00000190745 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21910-201ENSMUST00000191163 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21849-201ENSMUST00000191571 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm28678-201ENSMUST00000191593 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm20910-201ENSMUST00000193268 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gm21871-201ENSMUST00000194621 696 ntBASIC14.3□□□□□ -0.12
CopeO89079 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.3□□□□□ -0.12
CopeO89079 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CopeO89079 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CopeO89079 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CopeO89079 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.3□□□□□ -0.12
CopeO89079 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CopeO89079 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CopeO89079 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopeO89079 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms