Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.38□□□□□ -0.43
CcnkO88874 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.38□□□□□ -0.43
CcnkO88874 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Pck2-205ENSMUST00000226352 2784 ntBASIC12.38□□□□□ -0.43
CcnkO88874 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CcnkO88874 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CcnkO88874 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CcnkO88874 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CcnkO88874 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.38□□□□□ -0.43
CcnkO88874 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.38□□□□□ -0.43
CcnkO88874 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.38□□□□□ -0.43
CcnkO88874 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CcnkO88874 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.38□□□□□ -0.43
CcnkO88874 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CcnkO88874 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CcnkO88874 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.38□□□□□ -0.43
CcnkO88874 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcnkO88874 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.38□□□□□ -0.43
CcnkO88874 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CcnkO88874 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.37□□□□□ -0.43
CcnkO88874 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CcnkO88874 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.37□□□□□ -0.43
CcnkO88874 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
CcnkO88874 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.37□□□□□ -0.43
CcnkO88874 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CcnkO88874 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcnkO88874 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CcnkO88874 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.36□□□□□ -0.43
CcnkO88874 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CcnkO88874 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.36□□□□□ -0.43
CcnkO88874 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.36□□□□□ -0.43
CcnkO88874 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.36□□□□□ -0.43
CcnkO88874 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.36□□□□□ -0.43
CcnkO88874 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.36□□□□□ -0.43
CcnkO88874 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.36□□□□□ -0.43
CcnkO88874 Gm9385-201ENSMUST00000117563 472 ntBASIC12.36□□□□□ -0.43
CcnkO88874 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.36□□□□□ -0.43
CcnkO88874 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.36□□□□□ -0.43
CcnkO88874 Gm44492-201ENSMUST00000197012 141 ntBASIC12.36□□□□□ -0.43
CcnkO88874 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.36□□□□□ -0.43
CcnkO88874 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.36□□□□□ -0.43
CcnkO88874 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms