Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1bO88384 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vti1bO88384 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Vti1bO88384 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.26□□□□□ -0.29
Vti1bO88384 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.26□□□□□ -0.29
Vti1bO88384 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.26□□□□□ -0.29
Vti1bO88384 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.26□□□□□ -0.29
Vti1bO88384 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.26□□□□□ -0.29
Vti1bO88384 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.26□□□□□ -0.29
Vti1bO88384 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vti1bO88384 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vti1bO88384 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1bO88384 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1bO88384 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.26□□□□□ -0.29
Vti1bO88384 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Vti1bO88384 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.25□□□□□ -0.29
Vti1bO88384 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Vti1bO88384 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Vti1bO88384 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Gm43474-201ENSMUST00000196415 774 ntBASIC13.25□□□□□ -0.29
Vti1bO88384 Gm43125-201ENSMUST00000201724 730 ntBASIC13.25□□□□□ -0.29
Vti1bO88384 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vti1bO88384 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vti1bO88384 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vti1bO88384 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vti1bO88384 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1bO88384 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.24□□□□□ -0.29
Vti1bO88384 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.24□□□□□ -0.29
Vti1bO88384 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.24□□□□□ -0.29
Vti1bO88384 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1bO88384 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.24□□□□□ -0.29
Vti1bO88384 Gm25287-201ENSMUST00000103846 110 ntBASIC13.24□□□□□ -0.29
Vti1bO88384 Gm22918-201ENSMUST00000103855 110 ntBASIC13.24□□□□□ -0.29
Vti1bO88384 Gm26308-201ENSMUST00000157768 69 ntBASIC13.24□□□□□ -0.29
Vti1bO88384 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.24□□□□□ -0.29
Vti1bO88384 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.24□□□□□ -0.29
Vti1bO88384 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms