Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nid2O88322 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.81■□□□□ 0.44
Nid2O88322 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.81■□□□□ 0.44
Nid2O88322 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.81■□□□□ 0.44
Nid2O88322 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nid2O88322 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nid2O88322 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Gm11964-201ENSMUST00000120982 444 ntBASIC17.81■□□□□ 0.44
Nid2O88322 Gm2231-201ENSMUST00000125661 612 ntBASIC17.81■□□□□ 0.44
Nid2O88322 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.81■□□□□ 0.44
Nid2O88322 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Gm5363-201ENSMUST00000211927 938 ntBASIC17.81■□□□□ 0.44
Nid2O88322 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Nid2O88322 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nid2O88322 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nid2O88322 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.8■□□□□ 0.44
Nid2O88322 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Nid2O88322 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nid2O88322 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Nid2O88322 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Gm12363-201ENSMUST00000122250 668 ntBASIC17.8■□□□□ 0.44
Nid2O88322 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.8■□□□□ 0.44
Nid2O88322 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Gm25668-201ENSMUST00000157700 129 ntBASIC17.8■□□□□ 0.44
Nid2O88322 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 Mospd4-201ENSMUST00000180618 576 ntBASIC17.8■□□□□ 0.44
Nid2O88322 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.8■□□□□ 0.44
Nid2O88322 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.8■□□□□ 0.44
Nid2O88322 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.8■□□□□ 0.44
Nid2O88322 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nid2O88322 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Nid2O88322 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Nid2O88322 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.79■□□□□ 0.44
Nid2O88322 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nid2O88322 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.79■□□□□ 0.44
Nid2O88322 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Nid2O88322 Gm11637-201ENSMUST00000120601 592 ntBASIC17.79■□□□□ 0.44
Nid2O88322 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.79■□□□□ 0.44
Nid2O88322 Rps4l-202ENSMUST00000204242 789 ntBASIC17.79■□□□□ 0.44
Nid2O88322 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.79■□□□□ 0.44
Nid2O88322 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.79■□□□□ 0.44
Nid2O88322 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.79■□□□□ 0.44
Nid2O88322 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC17.79■□□□□ 0.44
Nid2O88322 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nid2O88322 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nid2O88322 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nid2O88322 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.78■□□□□ 0.44
Nid2O88322 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.78■□□□□ 0.44
Nid2O88322 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.78■□□□□ 0.44
Nid2O88322 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.78■□□□□ 0.44
Nid2O88322 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.78■□□□□ 0.44
Nid2O88322 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.78■□□□□ 0.44
Nid2O88322 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.78■□□□□ 0.44
Nid2O88322 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms