Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.43□□□□□ -0.1
Ttc3O88196 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ttc3O88196 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.43□□□□□ -0.1
Ttc3O88196 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.43□□□□□ -0.1
Ttc3O88196 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.43□□□□□ -0.1
Ttc3O88196 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.43□□□□□ -0.1
Ttc3O88196 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ttc3O88196 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Gm10478-201ENSMUST00000084451 396 ntBASIC14.43□□□□□ -0.1
Ttc3O88196 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ttc3O88196 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc3O88196 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ttc3O88196 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.42□□□□□ -0.1
Ttc3O88196 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.42□□□□□ -0.1
Ttc3O88196 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.42□□□□□ -0.1
Ttc3O88196 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.42□□□□□ -0.1
Ttc3O88196 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ttc3O88196 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.42□□□□□ -0.1
Ttc3O88196 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ttc3O88196 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.42□□□□□ -0.1
Ttc3O88196 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ttc3O88196 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.42□□□□□ -0.1
Ttc3O88196 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.42□□□□□ -0.1
Ttc3O88196 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.42□□□□□ -0.1
Ttc3O88196 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc3O88196 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ttc3O88196 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.42□□□□□ -0.1
Ttc3O88196 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ttc3O88196 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.41□□□□□ -0.1
Ttc3O88196 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Ttc3O88196 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ttc3O88196 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ttc3O88196 Gm27331-201ENSMUST00000183705 60 ntBASIC14.41□□□□□ -0.1
Ttc3O88196 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.41□□□□□ -0.1
Ttc3O88196 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.41□□□□□ -0.1
Ttc3O88196 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ttc3O88196 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.41□□□□□ -0.1
Ttc3O88196 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc3O88196 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms