Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.68■□□□□ 0.42
Ubr1O70481 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Ubr1O70481 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ubr1O70481 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.68■□□□□ 0.42
Ubr1O70481 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ubr1O70481 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ubr1O70481 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.68■□□□□ 0.42
Ubr1O70481 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.68■□□□□ 0.42
Ubr1O70481 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.68■□□□□ 0.42
Ubr1O70481 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.68■□□□□ 0.42
Ubr1O70481 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubr1O70481 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.67■□□□□ 0.42
Ubr1O70481 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.67■□□□□ 0.42
Ubr1O70481 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.67■□□□□ 0.42
Ubr1O70481 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.67■□□□□ 0.42
Ubr1O70481 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ubr1O70481 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ubr1O70481 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.67■□□□□ 0.42
Ubr1O70481 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ubr1O70481 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubr1O70481 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Gm12241-201ENSMUST00000118330 726 ntBASIC17.66■□□□□ 0.42
Ubr1O70481 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Gm42627-201ENSMUST00000197347 224 ntBASIC17.66■□□□□ 0.42
Ubr1O70481 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ubr1O70481 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.66■□□□□ 0.42
Ubr1O70481 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.66■□□□□ 0.42
Ubr1O70481 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubr1O70481 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ubr1O70481 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.65■□□□□ 0.42
Ubr1O70481 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.65■□□□□ 0.42
Ubr1O70481 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.65■□□□□ 0.42
Ubr1O70481 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.65■□□□□ 0.42
Ubr1O70481 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubr1O70481 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.64■□□□□ 0.42
Ubr1O70481 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ubr1O70481 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms