Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf13O54965 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf13O54965 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf13O54965 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf13O54965 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Gm15957-201ENSMUST00000118893 974 ntBASIC12.58□□□□□ -0.4
Rnf13O54965 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf13O54965 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf13O54965 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf13O54965 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.58□□□□□ -0.4
Rnf13O54965 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.58□□□□□ -0.4
Rnf13O54965 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.58□□□□□ -0.4
Rnf13O54965 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.58□□□□□ -0.4
Rnf13O54965 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.58□□□□□ -0.4
Rnf13O54965 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rnf13O54965 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.58□□□□□ -0.4
Rnf13O54965 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf13O54965 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf13O54965 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rnf13O54965 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rnf13O54965 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf13O54965 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rnf13O54965 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf13O54965 Gm9727-201ENSMUST00000161387 555 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 Gm44608-201ENSMUST00000206827 855 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf13O54965 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.57□□□□□ -0.4
Rnf13O54965 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf13O54965 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf13O54965 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf13O54965 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rnf13O54965 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Rnf13O54965 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf13O54965 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf13O54965 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Gm15427-201ENSMUST00000117288 531 ntBASIC12.56□□□□□ -0.4
Rnf13O54965 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.56□□□□□ -0.4
Rnf13O54965 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.56□□□□□ -0.4
Rnf13O54965 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.56□□□□□ -0.4
Rnf13O54965 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Gm5364-201ENSMUST00000216789 889 ntBASIC12.56□□□□□ -0.4
Rnf13O54965 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms