Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ChkaO54804 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ChkaO54804 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ChkaO54804 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.04□□□□□ -0.16
ChkaO54804 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ChkaO54804 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ChkaO54804 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.03□□□□□ -0.16
ChkaO54804 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ChkaO54804 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Gm22065-201ENSMUST00000103753 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm22066-201ENSMUST00000103761 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24932-201ENSMUST00000103763 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24115-201ENSMUST00000103799 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm22190-201ENSMUST00000103827 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm22191-201ENSMUST00000103831 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24721-201ENSMUST00000103849 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm28018-201ENSMUST00000103869 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm26399-201ENSMUST00000103937 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.03□□□□□ -0.16
ChkaO54804 Gm25349-201ENSMUST00000177728 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm23616-201ENSMUST00000177797 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm25871-201ENSMUST00000177816 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24752-201ENSMUST00000178240 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24496-201ENSMUST00000178287 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm25649-201ENSMUST00000178476 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm25548-201ENSMUST00000178681 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm23147-201ENSMUST00000178841 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm26095-201ENSMUST00000179270 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm22171-201ENSMUST00000179283 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm23936-201ENSMUST00000179354 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm22619-201ENSMUST00000179516 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm25255-201ENSMUST00000179579 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24755-201ENSMUST00000179691 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm26506-201ENSMUST00000179692 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm25086-201ENSMUST00000179931 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm23243-201ENSMUST00000180047 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24659-201ENSMUST00000180212 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm24169-201ENSMUST00000180244 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm23689-201ENSMUST00000180354 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm27359-201ENSMUST00000184153 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm27785-201ENSMUST00000184268 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm27466-201ENSMUST00000184396 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm27703-201ENSMUST00000184836 110 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm37935-201ENSMUST00000192012 982 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm29741-201ENSMUST00000192667 421 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Gm37714-201ENSMUST00000194742 342 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ChkaO54804 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
ChkaO54804 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.03□□□□□ -0.16
ChkaO54804 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ChkaO54804 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ChkaO54804 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
ChkaO54804 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.02□□□□□ -0.16
ChkaO54804 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms