Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prrt1O35449 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Prrt1O35449 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Prrt1O35449 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Prrt1O35449 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Prrt1O35449 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Prrt1O35449 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Prrt1O35449 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.73□□□□□ -0.53
Prrt1O35449 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prrt1O35449 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.73□□□□□ -0.53
Prrt1O35449 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.73□□□□□ -0.53
Prrt1O35449 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prrt1O35449 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.73□□□□□ -0.53
Prrt1O35449 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Prrt1O35449 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prrt1O35449 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Prrt1O35449 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Prrt1O35449 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Prrt1O35449 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.72□□□□□ -0.53
Prrt1O35449 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.72□□□□□ -0.53
Prrt1O35449 Gm5479-201ENSMUST00000160578 435 ntBASIC11.72□□□□□ -0.53
Prrt1O35449 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Prrt1O35449 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.72□□□□□ -0.53
Prrt1O35449 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.72□□□□□ -0.53
Prrt1O35449 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.72□□□□□ -0.53
Prrt1O35449 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.72□□□□□ -0.53
Prrt1O35449 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prrt1O35449 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Prrt1O35449 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.72□□□□□ -0.53
Prrt1O35449 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.72□□□□□ -0.53
Prrt1O35449 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prrt1O35449 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Prrt1O35449 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Prrt1O35449 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Prrt1O35449 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Prrt1O35449 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Prrt1O35449 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Gm12882-201ENSMUST00000121696 517 ntBASIC11.71□□□□□ -0.53
Prrt1O35449 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.71□□□□□ -0.53
Prrt1O35449 Gm7284-201ENSMUST00000131667 944 ntBASIC11.71□□□□□ -0.53
Prrt1O35449 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prrt1O35449 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Prrt1O35449 Gm4899-201ENSMUST00000178708 719 ntBASIC11.71□□□□□ -0.53
Prrt1O35449 Gm7977-201ENSMUST00000193787 748 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms