Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Gm10146-201ENSMUST00000072739 309 ntBASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
B020004C17RikJ3QP07 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
B020004C17RikJ3QP07 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Gm24526-201ENSMUST00000082921 158 ntBASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
B020004C17RikJ3QP07 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm12241-201ENSMUST00000118330 726 ntBASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm38341-201ENSMUST00000195357 515 ntBASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
B020004C17RikJ3QP07 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms