Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Mir8098-201ENSMUST00000184011 137 ntBASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shisa8J3QNX5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.65□□□□□ -0.38
Shisa8J3QNX5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Shisa8J3QNX5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Shisa8J3QNX5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shisa8J3QNX5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Shisa8J3QNX5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Shisa8J3QNX5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shisa8J3QNX5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms