Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcf11G3X9Z4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm6023-201ENSMUST00000118217 606 ntBASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm3890-201ENSMUST00000182416 207 ntBASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm43758-201ENSMUST00000199500 367 ntBASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm44985-201ENSMUST00000206202 1016 ntBASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm37736-201ENSMUST00000193564 2802 ntBASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Gm29396-201ENSMUST00000185659 716 ntBASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcf11G3X9Z4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Gm7584-201ENSMUST00000175829 940 ntBASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Gm27501-201ENSMUST00000183599 107 ntBASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Pcf11G3X9Z4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcf11G3X9Z4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Gm13350-201ENSMUST00000120519 479 ntBASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Gm37259-201ENSMUST00000193903 849 ntBASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Gm29340-201ENSMUST00000188763 3854 ntBASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcf11G3X9Z4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Gm7809-201ENSMUST00000153199 742 ntBASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms